Use BioThings Studio
The BioThings SDK is a Python package to build and deploy annotated Smart APIs from flat data files. Multiple BioThings APIs can be built using the BioThings Hub, and exposed using BioThings Web.
See the BioThings API Specifications.
Deploy BioThings Studio#
BioThings Studio enables to deploy a Docker container with all dependencies required to build and expose BioThings APIs. See the BioThings Studio documentation.
Access BioThings Studio web UI at http://localhost:8880
Access BioThings API at http://localhost:7080
Volume shared in workspace/biothings.
Use the BioThings SDK#
Available on PyPi. BioThings SDK provides a Python-based toolkit to build high-performance data APIs (or web services) from a single data source or multiple data sources. It has the particular focus on building data APIs for biomedical-related entities, a.k.a "BioThings" (such as genes, genetic variants, drugs, chemicals, diseases, etc).
Documentation about BioThings SDK can be found at http://docs.biothings.io
Use the BioThings Explorer#
BioThings APIs can then be queried by the BioThings Explorer: https://biothings.io/explorer
A SDK is also available on PyPi to use the BioThings Explorer
Jupyter Notebooks:
Expose a new data source#
To be developed.